Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.11■□□□□ 0.33
VTNP04004 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.11■□□□□ 0.33
VTNP04004 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.11■□□□□ 0.33
VTNP04004 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.11■□□□□ 0.33
VTNP04004 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.11■□□□□ 0.33
VTNP04004 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
VTNP04004 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.11■□□□□ 0.33
VTNP04004 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.11■□□□□ 0.33
VTNP04004 AC007551.1-201ENST00000457394 519 ntBASIC17.11■□□□□ 0.33
VTNP04004 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.11■□□□□ 0.33
VTNP04004 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 AC244669.2-201ENST00000612320 853 ntBASIC17.11■□□□□ 0.33
VTNP04004 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VTNP04004 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.11■□□□□ 0.33
VTNP04004 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.11■□□□□ 0.33
VTNP04004 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VTNP04004 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.11■□□□□ 0.33
VTNP04004 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.11■□□□□ 0.33
VTNP04004 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VTNP04004 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
VTNP04004 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VTNP04004 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.11■□□□□ 0.33
VTNP04004 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 AL138799.1-201ENST00000448213 1675 ntBASIC17.1■□□□□ 0.33
VTNP04004 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.1■□□□□ 0.33
VTNP04004 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
VTNP04004 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.1■□□□□ 0.33
VTNP04004 AC099336.1-201ENST00000417053 1171 ntBASIC17.1■□□□□ 0.33
VTNP04004 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.1■□□□□ 0.33
VTNP04004 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.1■□□□□ 0.33
VTNP04004 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.1■□□□□ 0.33
VTNP04004 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.1■□□□□ 0.33
VTNP04004 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.1■□□□□ 0.33
VTNP04004 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.1■□□□□ 0.33
VTNP04004 AC022137.2-201ENST00000503482 481 ntBASIC17.1■□□□□ 0.33
VTNP04004 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.1■□□□□ 0.33
VTNP04004 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.1■□□□□ 0.33
VTNP04004 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.1■□□□□ 0.33
VTNP04004 AC025181.2-201ENST00000606994 802 ntBASIC17.1■□□□□ 0.33
VTNP04004 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
VTNP04004 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.1■□□□□ 0.33
VTNP04004 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.1■□□□□ 0.33
VTNP04004 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.1■□□□□ 0.33
VTNP04004 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
VTNP04004 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.1■□□□□ 0.33
VTNP04004 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.1■□□□□ 0.33
VTNP04004 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VTNP04004 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.09■□□□□ 0.33
VTNP04004 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
VTNP04004 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VTNP04004 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.09■□□□□ 0.33
VTNP04004 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VTNP04004 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms