Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
APOC1P02654 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC1P02654 GRK6P1-201ENST00000400595 1711 ntBASIC13.98□□□□□ -0.17
APOC1P02654 TMBIM7P-203ENST00000641617 1718 ntBASIC13.98□□□□□ -0.17
APOC1P02654 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.98□□□□□ -0.17
APOC1P02654 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
APOC1P02654 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
APOC1P02654 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC1P02654 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.98□□□□□ -0.17
APOC1P02654 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC1P02654 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 AC020658.6-201ENST00000623564 1870 ntBASIC13.97□□□□□ -0.17
APOC1P02654 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC1P02654 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC1P02654 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC1P02654 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
APOC1P02654 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
APOC1P02654 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
APOC1P02654 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC1P02654 DNAJB3-201ENST00000446806 729 ntBASIC13.97□□□□□ -0.17
APOC1P02654 TIMM8BP1-201ENST00000452384 211 ntBASIC13.97□□□□□ -0.17
APOC1P02654 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.97□□□□□ -0.17
APOC1P02654 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.97□□□□□ -0.17
APOC1P02654 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.97□□□□□ -0.17
APOC1P02654 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.97□□□□□ -0.17
APOC1P02654 AC084121.4-201ENST00000641598 221 ntBASIC13.97□□□□□ -0.17
APOC1P02654 AF228730.8-201ENST00000642140 221 ntBASIC13.97□□□□□ -0.17
APOC1P02654 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
APOC1P02654 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
APOC1P02654 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC1P02654 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC1P02654 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
APOC1P02654 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.97□□□□□ -0.17
APOC1P02654 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOC1P02654 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC1P02654 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC1P02654 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC1P02654 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC1P02654 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC1P02654 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC1P02654 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
APOC1P02654 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC1P02654 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC1P02654 FOXO1B-201ENST00000504678 1527 ntBASIC13.96□□□□□ -0.17
APOC1P02654 UXT-AS1-201ENST00000590504 1525 ntBASIC13.96□□□□□ -0.17
APOC1P02654 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC1P02654 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC1P02654 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.96□□□□□ -0.17
APOC1P02654 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC1P02654 AC006058.4-201ENST00000624016 1670 ntBASIC13.96□□□□□ -0.17
APOC1P02654 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
APOC1P02654 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC1P02654 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC1P02654 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
APOC1P02654 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
APOC1P02654 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC1P02654 SPCS2P4-201ENST00000436160 681 ntBASIC13.96□□□□□ -0.17
APOC1P02654 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC1P02654 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
APOC1P02654 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC1P02654 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.96□□□□□ -0.17
APOC1P02654 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC1P02654 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.96□□□□□ -0.17
APOC1P02654 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC1P02654 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC1P02654 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
APOC1P02654 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
APOC1P02654 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
APOC1P02654 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
APOC1P02654 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
APOC1P02654 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOC1P02654 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOC1P02654 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOC1P02654 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
APOC1P02654 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.96□□□□□ -0.18
APOC1P02654 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms