Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL1A1P02452 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL1A1P02452 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.61■□□□□ 0.57
COL1A1P02452 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
COL1A1P02452 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL1A1P02452 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.61■□□□□ 0.57
COL1A1P02452 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COL1A1P02452 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.6■□□□□ 0.57
COL1A1P02452 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
COL1A1P02452 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.6■□□□□ 0.57
COL1A1P02452 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
COL1A1P02452 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.6■□□□□ 0.57
COL1A1P02452 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COL1A1P02452 RNA5SP423-201ENST00000517127 109 ntBASIC18.6■□□□□ 0.57
COL1A1P02452 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.6■□□□□ 0.57
COL1A1P02452 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.6■□□□□ 0.57
COL1A1P02452 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.6■□□□□ 0.57
COL1A1P02452 AC106872.11-201ENST00000605838 421 ntBASIC18.6■□□□□ 0.57
COL1A1P02452 AL008638.5-201ENST00000623814 1298 ntBASIC18.6■□□□□ 0.57
COL1A1P02452 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
COL1A1P02452 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.6■□□□□ 0.57
COL1A1P02452 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.6■□□□□ 0.57
COL1A1P02452 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.6■□□□□ 0.57
COL1A1P02452 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.6■□□□□ 0.57
COL1A1P02452 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.6■□□□□ 0.57
COL1A1P02452 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.6■□□□□ 0.57
COL1A1P02452 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
COL1A1P02452 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.6■□□□□ 0.57
COL1A1P02452 AC090616.6-203ENST00000579186 1945 ntBASIC18.6■□□□□ 0.57
COL1A1P02452 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL1A1P02452 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COL1A1P02452 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.59■□□□□ 0.57
COL1A1P02452 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
COL1A1P02452 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.59■□□□□ 0.57
COL1A1P02452 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
COL1A1P02452 ARTN-209ENST00000479128 471 ntTSL 3 BASIC18.59■□□□□ 0.57
COL1A1P02452 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.59■□□□□ 0.57
COL1A1P02452 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.59■□□□□ 0.57
COL1A1P02452 AP001258.2-201ENST00000529891 490 ntBASIC18.59■□□□□ 0.57
COL1A1P02452 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.59■□□□□ 0.57
COL1A1P02452 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.59■□□□□ 0.57
COL1A1P02452 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.59■□□□□ 0.57
COL1A1P02452 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.59■□□□□ 0.57
COL1A1P02452 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COL1A1P02452 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.59■□□□□ 0.57
COL1A1P02452 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COL1A1P02452 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.59■□□□□ 0.57
COL1A1P02452 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.59■□□□□ 0.57
COL1A1P02452 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.59■□□□□ 0.57
COL1A1P02452 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.59■□□□□ 0.57
COL1A1P02452 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COL1A1P02452 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COL1A1P02452 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.59■□□□□ 0.57
COL1A1P02452 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
COL1A1P02452 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL1A1P02452 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COL1A1P02452 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL1A1P02452 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL1A1P02452 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL1A1P02452 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
COL1A1P02452 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms