Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.49□□□□□ -0.41
IFNA1P01562 HSPA7-201ENST00000445535 1927 ntBASIC12.49□□□□□ -0.41
IFNA1P01562 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.49□□□□□ -0.41
IFNA1P01562 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
IFNA1P01562 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.49□□□□□ -0.41
IFNA1P01562 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.49□□□□□ -0.41
IFNA1P01562 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 LINC01568-207ENST00000641790 1380 ntBASIC12.49□□□□□ -0.41
IFNA1P01562 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 TSPY22P-201ENST00000427496 604 ntBASIC12.49□□□□□ -0.41
IFNA1P01562 LIN28AP1-201ENST00000429574 405 ntBASIC12.49□□□□□ -0.41
IFNA1P01562 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.49□□□□□ -0.41
IFNA1P01562 ATP5G1P1-201ENST00000448724 379 ntBASIC12.49□□□□□ -0.41
IFNA1P01562 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.49□□□□□ -0.41
IFNA1P01562 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
IFNA1P01562 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.49□□□□□ -0.41
IFNA1P01562 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.49□□□□□ -0.41
IFNA1P01562 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.49□□□□□ -0.41
IFNA1P01562 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.49□□□□□ -0.41
IFNA1P01562 AC005412.3-201ENST00000580309 715 ntBASIC12.49□□□□□ -0.41
IFNA1P01562 USP36-216ENST00000589424 970 ntTSL 5 BASIC12.49□□□□□ -0.41
IFNA1P01562 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.49□□□□□ -0.41
IFNA1P01562 AP000867.4-201ENST00000641616 219 ntBASIC12.49□□□□□ -0.41
IFNA1P01562 AF228730.7-201ENST00000641842 219 ntBASIC12.49□□□□□ -0.41
IFNA1P01562 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
IFNA1P01562 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
IFNA1P01562 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.49□□□□□ -0.41
IFNA1P01562 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.49□□□□□ -0.41
IFNA1P01562 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
IFNA1P01562 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IFNA1P01562 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
IFNA1P01562 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.48□□□□□ -0.41
IFNA1P01562 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.48□□□□□ -0.41
IFNA1P01562 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
IFNA1P01562 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
IFNA1P01562 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.48□□□□□ -0.41
IFNA1P01562 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
IFNA1P01562 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
IFNA1P01562 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
IFNA1P01562 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
IFNA1P01562 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
IFNA1P01562 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.48□□□□□ -0.41
IFNA1P01562 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.48□□□□□ -0.41
IFNA1P01562 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.48□□□□□ -0.41
IFNA1P01562 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.48□□□□□ -0.41
IFNA1P01562 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.48□□□□□ -0.41
IFNA1P01562 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.48□□□□□ -0.41
IFNA1P01562 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.48□□□□□ -0.41
IFNA1P01562 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.48□□□□□ -0.41
IFNA1P01562 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.48□□□□□ -0.41
IFNA1P01562 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.48□□□□□ -0.41
IFNA1P01562 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
IFNA1P01562 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
IFNA1P01562 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.48□□□□□ -0.41
IFNA1P01562 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms