Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.12■□□□□ 0.49
CTDNEP1O95476 AC092337.1-201ENST00000568699 1129 ntBASIC18.12■□□□□ 0.49
CTDNEP1O95476 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.12■□□□□ 0.49
CTDNEP1O95476 AC025181.2-201ENST00000606994 802 ntBASIC18.12■□□□□ 0.49
CTDNEP1O95476 AL390754.1-201ENST00000619088 582 ntBASIC18.12■□□□□ 0.49
CTDNEP1O95476 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTDNEP1O95476 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTDNEP1O95476 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.12■□□□□ 0.49
CTDNEP1O95476 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTDNEP1O95476 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTDNEP1O95476 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CTDNEP1O95476 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTDNEP1O95476 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTDNEP1O95476 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.12■□□□□ 0.49
CTDNEP1O95476 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CTDNEP1O95476 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.12■□□□□ 0.49
CTDNEP1O95476 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CTDNEP1O95476 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTDNEP1O95476 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 AC092183.1-201ENST00000469884 875 ntBASIC18.11■□□□□ 0.49
CTDNEP1O95476 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 AC106028.4-201ENST00000614509 607 ntBASIC18.11■□□□□ 0.49
CTDNEP1O95476 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.11■□□□□ 0.49
CTDNEP1O95476 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTDNEP1O95476 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CTDNEP1O95476 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDNEP1O95476 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDNEP1O95476 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDNEP1O95476 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDNEP1O95476 AP000845.1-201ENST00000581677 2131 ntBASIC18.1■□□□□ 0.49
CTDNEP1O95476 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDNEP1O95476 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTDNEP1O95476 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDNEP1O95476 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CTDNEP1O95476 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CTDNEP1O95476 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CTDNEP1O95476 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDNEP1O95476 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CTDNEP1O95476 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CTDNEP1O95476 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.1■□□□□ 0.49
CTDNEP1O95476 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CTDNEP1O95476 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CTDNEP1O95476 IGHV3-42-201ENST00000520410 361 ntBASIC18.1■□□□□ 0.49
CTDNEP1O95476 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.1■□□□□ 0.49
CTDNEP1O95476 AC005498.2-205ENST00000593218 784 ntBASIC18.1■□□□□ 0.49
CTDNEP1O95476 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.1■□□□□ 0.49
CTDNEP1O95476 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.1■□□□□ 0.49
CTDNEP1O95476 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CTDNEP1O95476 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDNEP1O95476 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CTDNEP1O95476 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.1■□□□□ 0.49
CTDNEP1O95476 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
CTDNEP1O95476 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTDNEP1O95476 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CTDNEP1O95476 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CTDNEP1O95476 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTDNEP1O95476 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.09■□□□□ 0.49
CTDNEP1O95476 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTDNEP1O95476 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.09■□□□□ 0.49
CTDNEP1O95476 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CTDNEP1O95476 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.09■□□□□ 0.49
CTDNEP1O95476 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTDNEP1O95476 AC138969.3-201ENST00000546612 1459 ntBASIC18.09■□□□□ 0.49
CTDNEP1O95476 AC138932.2-201ENST00000548268 1459 ntBASIC18.09■□□□□ 0.49
CTDNEP1O95476 AC126755.4-201ENST00000549796 1459 ntBASIC18.09■□□□□ 0.49
CTDNEP1O95476 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTDNEP1O95476 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTDNEP1O95476 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTDNEP1O95476 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms