Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.5■□□□□ 0.39
CLSTN1O94985 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CLSTN1O94985 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.5■□□□□ 0.39
CLSTN1O94985 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.49■□□□□ 0.39
CLSTN1O94985 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.49■□□□□ 0.39
CLSTN1O94985 KRT18P28-201ENST00000453838 1332 ntBASIC17.49■□□□□ 0.39
CLSTN1O94985 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CLSTN1O94985 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CLSTN1O94985 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.49■□□□□ 0.39
CLSTN1O94985 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.49■□□□□ 0.39
CLSTN1O94985 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.49■□□□□ 0.39
CLSTN1O94985 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.49■□□□□ 0.39
CLSTN1O94985 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.49■□□□□ 0.39
CLSTN1O94985 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.49■□□□□ 0.39
CLSTN1O94985 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.49■□□□□ 0.39
CLSTN1O94985 AC026150.2-201ENST00000564693 1156 ntBASIC17.49■□□□□ 0.39
CLSTN1O94985 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CLSTN1O94985 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
CLSTN1O94985 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.49■□□□□ 0.39
CLSTN1O94985 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.49■□□□□ 0.39
CLSTN1O94985 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CLSTN1O94985 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CLSTN1O94985 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.49■□□□□ 0.39
CLSTN1O94985 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.49■□□□□ 0.39
CLSTN1O94985 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.49■□□□□ 0.39
CLSTN1O94985 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLSTN1O94985 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
CLSTN1O94985 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLSTN1O94985 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLSTN1O94985 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLSTN1O94985 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLSTN1O94985 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.48■□□□□ 0.39
CLSTN1O94985 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.48■□□□□ 0.39
CLSTN1O94985 FOXO1B-201ENST00000504678 1527 ntBASIC17.48■□□□□ 0.39
CLSTN1O94985 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.48■□□□□ 0.39
CLSTN1O94985 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.48■□□□□ 0.39
CLSTN1O94985 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
CLSTN1O94985 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.48■□□□□ 0.39
CLSTN1O94985 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLSTN1O94985 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLSTN1O94985 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLSTN1O94985 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLSTN1O94985 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLSTN1O94985 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.48■□□□□ 0.39
CLSTN1O94985 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.48■□□□□ 0.39
CLSTN1O94985 SPDYE7P-202ENST00000420373 878 ntBASIC17.48■□□□□ 0.39
CLSTN1O94985 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.48■□□□□ 0.39
CLSTN1O94985 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.48■□□□□ 0.39
CLSTN1O94985 FAM86GP-201ENST00000448322 971 ntBASIC17.48■□□□□ 0.39
CLSTN1O94985 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.48■□□□□ 0.39
CLSTN1O94985 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLSTN1O94985 AC025678.2-201ENST00000562061 970 ntBASIC17.48■□□□□ 0.39
CLSTN1O94985 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.48■□□□□ 0.39
CLSTN1O94985 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.48■□□□□ 0.39
CLSTN1O94985 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLSTN1O94985 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
CLSTN1O94985 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC17.48■□□□□ 0.39
CLSTN1O94985 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLSTN1O94985 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CLSTN1O94985 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLSTN1O94985 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLSTN1O94985 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.48■□□□□ 0.39
CLSTN1O94985 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLSTN1O94985 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLSTN1O94985 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.48■□□□□ 0.39
CLSTN1O94985 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLSTN1O94985 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLSTN1O94985 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLSTN1O94985 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLSTN1O94985 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLSTN1O94985 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLSTN1O94985 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLSTN1O94985 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLSTN1O94985 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CLSTN1O94985 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.47■□□□□ 0.39
CLSTN1O94985 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLSTN1O94985 AC023824.1-201ENST00000562945 2975 ntBASIC17.47■□□□□ 0.39
CLSTN1O94985 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLSTN1O94985 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CLSTN1O94985 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLSTN1O94985 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.47■□□□□ 0.39
CLSTN1O94985 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLSTN1O94985 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms