Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.27■□□□□ 0.51
CDKL5O76039 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.26■□□□□ 0.51
CDKL5O76039 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CDKL5O76039 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDKL5O76039 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.26■□□□□ 0.51
CDKL5O76039 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 AC023157.3-201ENST00000619086 2088 ntBASIC18.26■□□□□ 0.51
CDKL5O76039 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 AC100757.3-201ENST00000622361 1406 ntBASIC18.26■□□□□ 0.51
CDKL5O76039 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.26■□□□□ 0.51
CDKL5O76039 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.26■□□□□ 0.51
CDKL5O76039 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDKL5O76039 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.26■□□□□ 0.51
CDKL5O76039 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.26■□□□□ 0.51
CDKL5O76039 AC015922.1-201ENST00000421102 1152 ntBASIC18.26■□□□□ 0.51
CDKL5O76039 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.26■□□□□ 0.51
CDKL5O76039 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.26■□□□□ 0.51
CDKL5O76039 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.26■□□□□ 0.51
CDKL5O76039 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.26■□□□□ 0.51
CDKL5O76039 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.26■□□□□ 0.51
CDKL5O76039 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.26■□□□□ 0.51
CDKL5O76039 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
CDKL5O76039 GPALPP1-207ENST00000611650 899 ntBASIC18.26■□□□□ 0.51
CDKL5O76039 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.26■□□□□ 0.51
CDKL5O76039 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.26■□□□□ 0.51
CDKL5O76039 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.26■□□□□ 0.51
CDKL5O76039 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.26■□□□□ 0.51
CDKL5O76039 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDKL5O76039 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.26■□□□□ 0.51
CDKL5O76039 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CDKL5O76039 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.26■□□□□ 0.51
CDKL5O76039 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.26■□□□□ 0.51
CDKL5O76039 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CDKL5O76039 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDKL5O76039 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CDKL5O76039 AC138035.3-201ENST00000622706 2791 ntBASIC18.25■□□□□ 0.51
CDKL5O76039 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.25■□□□□ 0.51
CDKL5O76039 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.25■□□□□ 0.51
CDKL5O76039 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDKL5O76039 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.25■□□□□ 0.51
CDKL5O76039 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.25■□□□□ 0.51
CDKL5O76039 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 RPL13P2-201ENST00000440687 659 ntBASIC18.25■□□□□ 0.51
CDKL5O76039 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.25■□□□□ 0.51
CDKL5O76039 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.25■□□□□ 0.51
CDKL5O76039 IGHV3-42-201ENST00000520410 361 ntBASIC18.25■□□□□ 0.51
CDKL5O76039 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.25■□□□□ 0.51
CDKL5O76039 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDKL5O76039 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.25■□□□□ 0.51
CDKL5O76039 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 AC006486.2-201ENST00000624246 2199 ntBASIC18.25■□□□□ 0.51
CDKL5O76039 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.25■□□□□ 0.51
CDKL5O76039 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.25■□□□□ 0.51
CDKL5O76039 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.25■□□□□ 0.51
CDKL5O76039 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.25■□□□□ 0.51
CDKL5O76039 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDKL5O76039 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.25■□□□□ 0.51
CDKL5O76039 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CDKL5O76039 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDKL5O76039 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKL5O76039 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.24■□□□□ 0.51
CDKL5O76039 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.24■□□□□ 0.51
CDKL5O76039 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.24■□□□□ 0.51
CDKL5O76039 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.24■□□□□ 0.51
CDKL5O76039 AC126365.1-201ENST00000578585 1514 ntBASIC18.24■□□□□ 0.51
CDKL5O76039 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKL5O76039 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKL5O76039 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms