Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RFPL1O75677 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RFPL1O75677 AL390755.1-201ENST00000623716 2027 ntBASIC15.8■□□□□ 0.12
RFPL1O75677 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
RFPL1O75677 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RFPL1O75677 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.8■□□□□ 0.12
RFPL1O75677 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.8■□□□□ 0.12
RFPL1O75677 LINC00552-201ENST00000625151 2579 ntBASIC15.8■□□□□ 0.12
RFPL1O75677 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.79■□□□□ 0.12
RFPL1O75677 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RFPL1O75677 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.79■□□□□ 0.12
RFPL1O75677 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RFPL1O75677 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.79■□□□□ 0.12
RFPL1O75677 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.79■□□□□ 0.12
RFPL1O75677 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.79■□□□□ 0.12
RFPL1O75677 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 AC142381.1-201ENST00000426099 345 ntBASIC15.79■□□□□ 0.12
RFPL1O75677 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.79■□□□□ 0.12
RFPL1O75677 PHKG1P2-201ENST00000457537 863 ntBASIC15.79■□□□□ 0.12
RFPL1O75677 KRT8P48-201ENST00000515599 1220 ntBASIC15.79■□□□□ 0.12
RFPL1O75677 AC190387.1-201ENST00000551683 408 ntBASIC15.79■□□□□ 0.12
RFPL1O75677 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.79■□□□□ 0.12
RFPL1O75677 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.79■□□□□ 0.12
RFPL1O75677 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.79■□□□□ 0.12
RFPL1O75677 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.79■□□□□ 0.12
RFPL1O75677 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RFPL1O75677 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.79■□□□□ 0.12
RFPL1O75677 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RFPL1O75677 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RFPL1O75677 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RFPL1O75677 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RFPL1O75677 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RFPL1O75677 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFPL1O75677 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.78■□□□□ 0.12
RFPL1O75677 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.78■□□□□ 0.12
RFPL1O75677 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RFPL1O75677 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RFPL1O75677 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RFPL1O75677 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.78■□□□□ 0.12
RFPL1O75677 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RFPL1O75677 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.78■□□□□ 0.12
RFPL1O75677 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RFPL1O75677 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.78■□□□□ 0.12
RFPL1O75677 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.78■□□□□ 0.12
RFPL1O75677 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.78■□□□□ 0.12
RFPL1O75677 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.78■□□□□ 0.12
RFPL1O75677 EEF1DP4-201ENST00000446006 880 ntBASIC15.78■□□□□ 0.12
RFPL1O75677 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.78■□□□□ 0.12
RFPL1O75677 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 INGX-202ENST00000489074 768 ntBASIC15.78■□□□□ 0.12
RFPL1O75677 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.78■□□□□ 0.12
RFPL1O75677 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.78■□□□□ 0.12
RFPL1O75677 AC027307.2-201ENST00000591252 911 ntBASIC15.78■□□□□ 0.12
RFPL1O75677 AC097359.3-201ENST00000603982 1210 ntBASIC15.78■□□□□ 0.12
RFPL1O75677 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.78■□□□□ 0.12
RFPL1O75677 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFPL1O75677 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.78■□□□□ 0.12
RFPL1O75677 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.78■□□□□ 0.12
RFPL1O75677 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.78■□□□□ 0.12
RFPL1O75677 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms