Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC6.82□□□□□ -1.32
USH2AO75445 RNLS-203ENST00000437752 525 ntTSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC6.82□□□□□ -1.32
USH2AO75445 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC6.82□□□□□ -1.32
USH2AO75445 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC6.82□□□□□ -1.32
USH2AO75445 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
USH2AO75445 KRT8P21-201ENST00000430398 1491 ntBASIC6.82□□□□□ -1.32
USH2AO75445 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC6.82□□□□□ -1.32
USH2AO75445 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC6.82□□□□□ -1.32
USH2AO75445 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 PSME2-217ENST00000615264 874 ntTSL 5 BASIC6.82□□□□□ -1.32
USH2AO75445 PSME2-218ENST00000630027 185 ntTSL 3 BASIC6.82□□□□□ -1.32
USH2AO75445 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC6.82□□□□□ -1.32
USH2AO75445 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USH2AO75445 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
USH2AO75445 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
USH2AO75445 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
USH2AO75445 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
USH2AO75445 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 AC078875.1-201ENST00000431907 724 ntBASIC6.81□□□□□ -1.32
USH2AO75445 RBPMSLP-201ENST00000433427 502 ntBASIC6.81□□□□□ -1.32
USH2AO75445 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC6.81□□□□□ -1.32
USH2AO75445 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 TPM1-223ENST00000560445 485 ntTSL 3 BASIC6.81□□□□□ -1.32
USH2AO75445 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC6.81□□□□□ -1.32
USH2AO75445 NUDT4P2-201ENST00000578341 546 ntBASIC6.81□□□□□ -1.32
USH2AO75445 NAT9-220ENST00000582870 896 ntTSL 5 BASIC6.81□□□□□ -1.32
USH2AO75445 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC6.81□□□□□ -1.32
USH2AO75445 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC6.81□□□□□ -1.32
USH2AO75445 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC6.81□□□□□ -1.32
USH2AO75445 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC6.81□□□□□ -1.32
USH2AO75445 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
USH2AO75445 TUBB8P12-201ENST00000308911 1335 ntBASIC6.81□□□□□ -1.32
USH2AO75445 TUBB7P-202ENST00000428444 1305 ntBASIC6.81□□□□□ -1.32
USH2AO75445 SIGLEC20P-201ENST00000595243 1311 ntBASIC6.81□□□□□ -1.32
USH2AO75445 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC6.81□□□□□ -1.32
USH2AO75445 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC6.81□□□□□ -1.32
USH2AO75445 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
USH2AO75445 AL583805.1-201ENST00000391389 531 ntBASIC6.81□□□□□ -1.32
USH2AO75445 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC6.81□□□□□ -1.32
USH2AO75445 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC6.81□□□□□ -1.32
USH2AO75445 RN7SL173P-201ENST00000461853 292 ntBASIC6.81□□□□□ -1.32
USH2AO75445 AP000911.2-201ENST00000534330 502 ntBASIC6.81□□□□□ -1.32
USH2AO75445 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC6.81□□□□□ -1.32
USH2AO75445 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC6.81□□□□□ -1.32
USH2AO75445 AL358472.3-201ENST00000608147 415 ntBASIC6.81□□□□□ -1.32
USH2AO75445 AC107464.3-201ENST00000609172 737 ntBASIC6.81□□□□□ -1.32
USH2AO75445 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC6.81□□□□□ -1.32
USH2AO75445 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC6.81□□□□□ -1.32
USH2AO75445 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
USH2AO75445 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC6.81□□□□□ -1.32
USH2AO75445 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC6.81□□□□□ -1.32
USH2AO75445 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC6.81□□□□□ -1.32
USH2AO75445 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC6.81□□□□□ -1.32
USH2AO75445 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
USH2AO75445 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC6.81□□□□□ -1.32
USH2AO75445 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC6.81□□□□□ -1.32
USH2AO75445 AC120498.5-201ENST00000561757 299 ntBASIC6.81□□□□□ -1.32
USH2AO75445 AC142086.5-202ENST00000562500 217 ntBASIC6.81□□□□□ -1.32
USH2AO75445 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC6.81□□□□□ -1.32
USH2AO75445 LINC01815-202ENST00000641468 1409 ntBASIC6.81□□□□□ -1.32
USH2AO75445 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USH2AO75445 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC6.81□□□□□ -1.32
USH2AO75445 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms