Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL13O43927 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL13O43927 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.05□□□□□ -0.16
CXCL13O43927 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL13O43927 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CXCL13O43927 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL13O43927 AL121723.1-201ENST00000445194 1519 ntBASIC14.05□□□□□ -0.16
CXCL13O43927 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL13O43927 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
CXCL13O43927 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL13O43927 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL13O43927 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL13O43927 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.04□□□□□ -0.16
CXCL13O43927 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CXCL13O43927 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CXCL13O43927 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
CXCL13O43927 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.04□□□□□ -0.16
CXCL13O43927 PKD1P5-201ENST00000532415 10291 ntBASIC14.04□□□□□ -0.16
CXCL13O43927 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL13O43927 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CXCL13O43927 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL13O43927 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL13O43927 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CXCL13O43927 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.04□□□□□ -0.16
CXCL13O43927 MYCLP2-201ENST00000449268 967 ntBASIC14.04□□□□□ -0.16
CXCL13O43927 RN7SL399P-201ENST00000471648 279 ntBASIC14.04□□□□□ -0.16
CXCL13O43927 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.04□□□□□ -0.16
CXCL13O43927 AC104596.2-201ENST00000512793 793 ntBASIC14.04□□□□□ -0.16
CXCL13O43927 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.04□□□□□ -0.16
CXCL13O43927 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.04□□□□□ -0.16
CXCL13O43927 RRP7BP-205ENST00000566851 833 ntBASIC14.04□□□□□ -0.16
CXCL13O43927 AC093726.1-201ENST00000608064 963 ntBASIC14.04□□□□□ -0.16
CXCL13O43927 AC099568.2-201ENST00000609194 695 ntBASIC14.04□□□□□ -0.16
CXCL13O43927 AL391069.4-201ENST00000609583 481 ntBASIC14.04□□□□□ -0.16
CXCL13O43927 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.04□□□□□ -0.16
CXCL13O43927 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CXCL13O43927 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.04□□□□□ -0.16
CXCL13O43927 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL13O43927 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL13O43927 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL13O43927 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL13O43927 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL13O43927 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL13O43927 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL13O43927 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL13O43927 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL13O43927 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.03□□□□□ -0.16
CXCL13O43927 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL13O43927 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL13O43927 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL13O43927 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CXCL13O43927 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
CXCL13O43927 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CXCL13O43927 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.03□□□□□ -0.16
CXCL13O43927 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.03□□□□□ -0.16
CXCL13O43927 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.03□□□□□ -0.16
CXCL13O43927 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL13O43927 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.03□□□□□ -0.16
CXCL13O43927 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.03□□□□□ -0.16
CXCL13O43927 WASH4P-201ENST00000564273 1246 ntBASIC14.03□□□□□ -0.16
CXCL13O43927 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.03□□□□□ -0.16
CXCL13O43927 MIR8072-201ENST00000614241 80 ntBASIC14.03□□□□□ -0.16
CXCL13O43927 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.03□□□□□ -0.16
CXCL13O43927 AC025048.6-201ENST00000634326 1161 ntBASIC14.03□□□□□ -0.16
CXCL13O43927 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
CXCL13O43927 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL13O43927 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms