Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MIR658-201ENST00000385210 100 ntBASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MIR1909-201ENST00000411312 80 ntBASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CLUHP6-201ENST00000580789 941 ntBASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms