Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 HIST3H2BA-201ENST00000436555 524 ntBASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 MIR6069-201ENST00000620069 79 ntBASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 AC103702.1-201ENST00000548801 2630 ntBASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 AL607033.1-201ENST00000623900 1599 ntBASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPDC1A2A3K4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 AC112693.3-201ENST00000624819 1983 ntBASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 SPDYE19P-201ENST00000338590 713 ntBASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 AC136604.1-201ENST00000418535 575 ntBASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 RN7SL692P-201ENST00000464677 288 ntBASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 SPDYE18-201ENST00000510091 1050 ntBASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 AL358472.5-202ENST00000641448 1267 ntBASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.46■□□□□ 0.55
PTPDC1A2A3K4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PTPDC1A2A3K4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 DOC2GP-202ENST00000514950 1163 ntBASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 AL596325.1-201ENST00000563991 1082 ntBASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.45■□□□□ 0.54
PTPDC1A2A3K4 AL109936.8-201ENST00000641772 604 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms