Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 AC107918.4-201ENST00000641966 3141 ntBASIC13.7□□□□□ -0.22
SHISA3A0PJX4 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 AC073648.2-201ENST00000510116 352 ntBASIC13.7□□□□□ -0.22
SHISA3A0PJX4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 MIR3652-201ENST00000579335 131 ntBASIC13.7□□□□□ -0.22
SHISA3A0PJX4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SHISA3A0PJX4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.69□□□□□ -0.22
SHISA3A0PJX4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 AC018712.1-201ENST00000455767 687 ntBASIC13.69□□□□□ -0.22
SHISA3A0PJX4 PHKG1P2-201ENST00000457537 863 ntBASIC13.69□□□□□ -0.22
SHISA3A0PJX4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 AL138918.1-201ENST00000568306 659 ntBASIC13.69□□□□□ -0.22
SHISA3A0PJX4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 TP73-AS1-207ENST00000624167 988 ntBASIC13.69□□□□□ -0.22
SHISA3A0PJX4 AC010507.1-201ENST00000633895 436 ntBASIC13.69□□□□□ -0.22
SHISA3A0PJX4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms