Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 KRT8P37-201ENST00000451609 1420 ntBASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 MIR1233-2-201ENST00000408138 82 ntBASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 MIR1233-1-201ENST00000408722 82 ntBASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 MTND6P24-201ENST00000440466 518 ntBASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 AL450472.2-201ENST00000603663 1156 ntBASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
TRGV1A0A0A0MS02 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 AC092127.1-201ENST00000567093 3455 ntBASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV1A0A0A0MS02 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 DBET-201ENST00000630918 3363 ntBASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 CD81-202ENST00000381036 880 ntTSL 3 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 AC254562.1-201ENST00000417586 456 ntBASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 AC004967.1-201ENST00000453589 447 ntBASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 AC093520.2-201ENST00000561830 333 ntBASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 AC009093.7-201ENST00000623853 1223 ntBASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 AC134684.3-201ENST00000641758 218 ntBASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 AC079781.4-201ENST00000641908 219 ntBASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
TRGV1A0A0A0MS02 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms