Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RNU1-129P-201ENST00000384064 167 ntBASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 FAM8A3P-201ENST00000427218 844 ntBASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 KRT18P67-201ENST00000432816 1264 ntBASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 RNPS1P1-201ENST00000507437 918 ntBASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 AC106730.1-201ENST00000566722 1090 ntBASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 U1.21-201ENST00000580816 167 ntBASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 AC025062.2-201ENST00000605477 670 ntBASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 KRT18P27-201ENST00000427733 1299 ntBASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 AL031055.1-201ENST00000606362 631 ntBASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 MIR1199-201ENST00000621445 119 ntBASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 AC148477.8-201ENST00000624298 468 ntBASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 REXO1L1P-202ENST00000608646 1974 ntBASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGB1Q9Y5G3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 AC023024.2-201ENST00000623561 1993 ntBASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 MRPL20P1-201ENST00000400819 433 ntBASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 AC093724.1-201ENST00000448659 1027 ntBASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 IGHV3-65-201ENST00000523210 341 ntBASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms