Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 AC105021.1-202ENST00000570572 669 ntBASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 AC003101.2-201ENST00000612557 442 ntBASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAPPC4Q9Y296 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 AL139400.1-201ENST00000366220 510 ntBASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 AC004449.1-201ENST00000564240 433 ntBASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 AC015911.4-201ENST00000588022 1070 ntBASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 AC013726.1-201ENST00000563747 2285 ntBASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 AC005912.2-201ENST00000619492 2400 ntBASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAPPC4Q9Y296 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAPPC4Q9Y296 AC063926.3-201ENST00000624734 5658 ntBASIC14.46□□□□□ -0.1
TRAPPC4Q9Y296 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.46□□□□□ -0.1
TRAPPC4Q9Y296 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAPPC4Q9Y296 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAPPC4Q9Y296 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
TRAPPC4Q9Y296 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAPPC4Q9Y296 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
TRAPPC4Q9Y296 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAPPC4Q9Y296 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
TRAPPC4Q9Y296 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAPPC4Q9Y296 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAPPC4Q9Y296 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.46□□□□□ -0.1
TRAPPC4Q9Y296 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAPPC4Q9Y296 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAPPC4Q9Y296 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAPPC4Q9Y296 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 LINC00552-201ENST00000625151 2579 ntBASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms