Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
PCDHGB4Q9UN71 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGB4Q9UN71 AL589702.1-201ENST00000641229 1509 ntBASIC15.33■□□□□ 0.05
PCDHGB4Q9UN71 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGB4Q9UN71 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGB4Q9UN71 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
PCDHGB4Q9UN71 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
PCDHGB4Q9UN71 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGB4Q9UN71 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGB4Q9UN71 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.33■□□□□ 0.05
PCDHGB4Q9UN71 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.33■□□□□ 0.05
PCDHGB4Q9UN71 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 PRYP6-201ENST00000514804 343 ntBASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 HLA-A-201ENST00000376802 1334 ntBASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 AC104109.2-201ENST00000602919 1418 ntBASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB4Q9UN71 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 KRT19P2-202ENST00000557173 1012 ntBASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 AC145285.3-201ENST00000564603 959 ntBASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 AC018845.2-201ENST00000568326 409 ntBASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 MIR4321-201ENST00000592276 80 ntBASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms