Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CALCOCO1Q9P1Z2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CALCOCO1Q9P1Z2 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CALCOCO1Q9P1Z2 AC097376.2-205ENST00000610159 5334 ntBASIC17.3■□□□□ 0.36
CALCOCO1Q9P1Z2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CALCOCO1Q9P1Z2 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CALCOCO1Q9P1Z2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CALCOCO1Q9P1Z2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CALCOCO1Q9P1Z2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.3■□□□□ 0.36
CALCOCO1Q9P1Z2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CALCOCO1Q9P1Z2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CALCOCO1Q9P1Z2 AC016027.1-202ENST00000607927 1699 ntBASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 LINC01101-201ENST00000622953 1884 ntBASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CALCOCO1Q9P1Z2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 MIR770-201ENST00000390219 98 ntBASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 AC004461.1-201ENST00000412461 403 ntBASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 AC105339.1-204ENST00000636249 355 ntBASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 PTENP1-202ENST00000532280 3996 ntBASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.28■□□□□ 0.36
CALCOCO1Q9P1Z2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 AC009090.5-201ENST00000624886 2285 ntBASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CALCOCO1Q9P1Z2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms