Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC104457.1-201ENST00000401024 814 ntBASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 AC253536.4-201ENST00000440539 267 ntBASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 RN7SL11P-201ENST00000471305 293 ntBASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 AC134698.3-201ENST00000523880 214 ntBASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 MIR3907-201ENST00000579424 151 ntBASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SLC52A1Q9NWF4 AC008132.1-202ENST00000342005 1389 ntBASIC22.08■■□□□ 1.12
SLC52A1Q9NWF4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC22.08■■□□□ 1.12
SLC52A1Q9NWF4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
SLC52A1Q9NWF4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
SLC52A1Q9NWF4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
SLC52A1Q9NWF4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 AC080080.1-201ENST00000625121 2420 ntBASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 Z97180.1-201ENST00000445173 988 ntBASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 AC013355.1-201ENST00000562625 723 ntBASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 AC026740.1-201ENST00000607068 791 ntBASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 AC091544.8-201ENST00000619490 361 ntBASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 AC079336.7-201ENST00000623428 1078 ntBASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC52A1Q9NWF4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 AC011742.3-201ENST00000439053 820 ntBASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 FTLP1-201ENST00000449155 526 ntBASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 AL161670.2-201ENST00000557650 1227 ntBASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 FGFR3P5-201ENST00000564496 886 ntBASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC22.06■■□□□ 1.12
SLC52A1Q9NWF4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 AC021723.1-201ENST00000486306 515 ntBASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms