Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RPL5P21-201ENST00000404620 815 ntBASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 TIMM17BP1-201ENST00000545713 516 ntBASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 CLK3P2-201ENST00000427566 1453 ntBASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 MIR661-201ENST00000384842 89 ntBASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 AC025181.2-201ENST00000606994 802 ntBASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 AC148477.4-201ENST00000613430 1793 ntBASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BLOC1S4Q9NUP1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.39■□□□□ 0.38
BLOC1S4Q9NUP1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
BLOC1S4Q9NUP1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
BLOC1S4Q9NUP1 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 GNAQP1-201ENST00000444815 1067 ntBASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms