Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.28■□□□□ 0.2
HPS4Q9NQG7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS4Q9NQG7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS4Q9NQG7 AP001282.1-201ENST00000531301 1499 ntBASIC16.28■□□□□ 0.2
HPS4Q9NQG7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.28■□□□□ 0.2
HPS4Q9NQG7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS4Q9NQG7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HPS4Q9NQG7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 AC006449.5-201ENST00000610658 2098 ntBASIC16.27■□□□□ 0.2
HPS4Q9NQG7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 SLED1-202ENST00000512051 380 ntBASIC16.27■□□□□ 0.2
HPS4Q9NQG7 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 TDH-203ENST00000531764 1110 ntBASIC16.27■□□□□ 0.2
HPS4Q9NQG7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 AC124283.3-201ENST00000570869 594 ntBASIC16.27■□□□□ 0.2
HPS4Q9NQG7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 PDIA3P1-201ENST00000471856 1510 ntBASIC16.27■□□□□ 0.2
HPS4Q9NQG7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HPS4Q9NQG7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HPS4Q9NQG7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HPS4Q9NQG7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.27■□□□□ 0.19
HPS4Q9NQG7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HPS4Q9NQG7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
HPS4Q9NQG7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HPS4Q9NQG7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HPS4Q9NQG7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.19
HPS4Q9NQG7 MST1L-201ENST00000442552 2185 ntBASIC16.27■□□□□ 0.19
HPS4Q9NQG7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
HPS4Q9NQG7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HPS4Q9NQG7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HPS4Q9NQG7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HPS4Q9NQG7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 REXO1L1P-202ENST00000608646 1974 ntBASIC16.26■□□□□ 0.19
HPS4Q9NQG7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 HAUS4P1-201ENST00000406739 1145 ntBASIC16.26■□□□□ 0.19
HPS4Q9NQG7 AC136604.1-201ENST00000418535 575 ntBASIC16.26■□□□□ 0.19
HPS4Q9NQG7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS4Q9NQG7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms