Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 RNU6-233P-201ENST00000410845 141 ntBASIC18.76■□□□□ 0.59
RTN4Q9NQC3 RPSAP41-201ENST00000439695 860 ntBASIC18.76■□□□□ 0.59
RTN4Q9NQC3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 AC073592.5-201ENST00000624854 528 ntBASIC18.76■□□□□ 0.59
RTN4Q9NQC3 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 TMBIM7P-203ENST00000641617 1718 ntBASIC18.76■□□□□ 0.59
RTN4Q9NQC3 INTS4P1-203ENST00000641008 3683 ntBASIC18.76■□□□□ 0.59
RTN4Q9NQC3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC18.76■□□□□ 0.59
RTN4Q9NQC3 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 AC020658.6-201ENST00000623564 1870 ntBASIC18.75■□□□□ 0.59
RTN4Q9NQC3 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 DUX4L17-201ENST00000557360 1267 ntBASIC18.75■□□□□ 0.59
RTN4Q9NQC3 AL353729.2-201ENST00000605859 1249 ntBASIC18.75■□□□□ 0.59
RTN4Q9NQC3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.75■□□□□ 0.59
RTN4Q9NQC3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC18.75■□□□□ 0.59
RTN4Q9NQC3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 GGT4P-201ENST00000623672 1708 ntBASIC18.74■□□□□ 0.59
RTN4Q9NQC3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 DUX4L26-201ENST00000489078 1255 ntBASIC18.74■□□□□ 0.59
RTN4Q9NQC3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 AP002490.2-201ENST00000524791 560 ntBASIC18.74■□□□□ 0.59
RTN4Q9NQC3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms