Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.61■□□□□ 0.25
CD248Q9HCU0 PIN1P1-201ENST00000412108 996 ntBASIC16.61■□□□□ 0.25
CD248Q9HCU0 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.61■□□□□ 0.25
CD248Q9HCU0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 RN7SL828P-201ENST00000607615 303 ntBASIC16.61■□□□□ 0.25
CD248Q9HCU0 AC008738.7-201ENST00000609744 511 ntBASIC16.61■□□□□ 0.25
CD248Q9HCU0 AL662799.1-202ENST00000614205 422 ntBASIC16.61■□□□□ 0.25
CD248Q9HCU0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 AC025048.6-201ENST00000634326 1161 ntBASIC16.61■□□□□ 0.25
CD248Q9HCU0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 AC087499.5-201ENST00000452760 1342 ntBASIC16.61■□□□□ 0.25
CD248Q9HCU0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 AC006538.1-201ENST00000567905 1585 ntBASIC16.6■□□□□ 0.25
CD248Q9HCU0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD248Q9HCU0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CD248Q9HCU0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD248Q9HCU0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD248Q9HCU0 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.59■□□□□ 0.25
CD248Q9HCU0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD248Q9HCU0 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD248Q9HCU0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD248Q9HCU0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CD248Q9HCU0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CD248Q9HCU0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD248Q9HCU0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD248Q9HCU0 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD248Q9HCU0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD248Q9HCU0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD248Q9HCU0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CD248Q9HCU0 AL080243.2-201ENST00000418783 582 ntBASIC16.59■□□□□ 0.25
CD248Q9HCU0 AL353705.2-201ENST00000428243 662 ntBASIC16.59■□□□□ 0.25
CD248Q9HCU0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.59■□□□□ 0.25
CD248Q9HCU0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms