Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC3Q9BY71 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
LRRC3Q9BY71 AL513523.2-202ENST00000427283 2040 ntBASIC16.33■□□□□ 0.21
LRRC3Q9BY71 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
LRRC3Q9BY71 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 AL355864.2-201ENST00000447420 863 ntBASIC16.33■□□□□ 0.2
LRRC3Q9BY71 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 AC022137.2-201ENST00000503482 481 ntBASIC16.33■□□□□ 0.2
LRRC3Q9BY71 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 AC244669.2-201ENST00000612320 853 ntBASIC16.33■□□□□ 0.2
LRRC3Q9BY71 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC3Q9BY71 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 MIR1908-201ENST00000410394 80 ntBASIC16.32■□□□□ 0.2
LRRC3Q9BY71 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 RNA5SP412-201ENST00000516234 123 ntBASIC16.32■□□□□ 0.2
LRRC3Q9BY71 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LRRC3Q9BY71 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.31■□□□□ 0.2
LRRC3Q9BY71 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 AL662844.4-201ENST00000606367 2838 ntBASIC16.31■□□□□ 0.2
LRRC3Q9BY71 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3Q9BY71 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms