Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 AC124067.4-201ENST00000519691 2379 ntBASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTFDC1Q9BY42 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 PCDH8P1-201ENST00000428983 2773 ntBASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 AC018695.7-201ENST00000624587 2492 ntBASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 PRORSD1P-202ENST00000563365 2154 ntBASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 KRT8P14-201ENST00000414254 1442 ntBASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 LTB4R2-202ENST00000528054 3092 ntBASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.82■□□□□ 0.6
RTFDC1Q9BY42 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 FAM8A4P-201ENST00000435433 1213 ntBASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 NKAIN1P1-201ENST00000435754 582 ntBASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.81■□□□□ 0.6
RTFDC1Q9BY42 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms