Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 MTND6P24-201ENST00000440466 518 ntBASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 FAM86GP-201ENST00000448322 971 ntBASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 PHKG1P2-201ENST00000457537 863 ntBASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 BANF1P1-201ENST00000553684 263 ntBASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 MIR6080-201ENST00000617359 66 ntBASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 AC090616.6-203ENST00000579186 1945 ntBASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 AC023824.1-201ENST00000562945 2975 ntBASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 AC093512.1-201ENST00000617969 520 ntBASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 AC009093.7-201ENST00000623853 1223 ntBASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.85□□□□□ -0.03
YIPF4Q9BSR8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
YIPF4Q9BSR8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms