Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
VRK1Q99986 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
VRK1Q99986 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
VRK1Q99986 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.99□□□□□ -0.17
VRK1Q99986 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.99□□□□□ -0.17
VRK1Q99986 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.99□□□□□ -0.17
VRK1Q99986 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.99□□□□□ -0.17
VRK1Q99986 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 AC027369.6-201ENST00000525520 931 ntBASIC13.99□□□□□ -0.17
VRK1Q99986 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.99□□□□□ -0.17
VRK1Q99986 AL139011.1-202ENST00000642063 584 ntBASIC13.99□□□□□ -0.17
VRK1Q99986 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.99□□□□□ -0.17
VRK1Q99986 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
VRK1Q99986 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.99□□□□□ -0.17
VRK1Q99986 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.99□□□□□ -0.17
VRK1Q99986 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.99□□□□□ -0.17
VRK1Q99986 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.99□□□□□ -0.17
VRK1Q99986 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.99□□□□□ -0.17
VRK1Q99986 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
VRK1Q99986 SNX33P1-201ENST00000592116 1762 ntBASIC13.99□□□□□ -0.17
VRK1Q99986 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VRK1Q99986 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VRK1Q99986 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.98□□□□□ -0.17
VRK1Q99986 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.98□□□□□ -0.17
VRK1Q99986 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.98□□□□□ -0.17
VRK1Q99986 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
VRK1Q99986 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.98□□□□□ -0.17
VRK1Q99986 AL353705.2-201ENST00000428243 662 ntBASIC13.98□□□□□ -0.17
VRK1Q99986 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.98□□□□□ -0.17
VRK1Q99986 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.98□□□□□ -0.17
VRK1Q99986 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.98□□□□□ -0.17
VRK1Q99986 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.98□□□□□ -0.17
VRK1Q99986 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 AL158211.3-201ENST00000607385 239 ntBASIC13.98□□□□□ -0.17
VRK1Q99986 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.98□□□□□ -0.17
VRK1Q99986 AC020765.3-201ENST00000613051 740 ntBASIC13.98□□□□□ -0.17
VRK1Q99986 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.98□□□□□ -0.17
VRK1Q99986 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.98□□□□□ -0.17
VRK1Q99986 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
VRK1Q99986 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VRK1Q99986 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.98□□□□□ -0.17
VRK1Q99986 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.98□□□□□ -0.17
VRK1Q99986 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VRK1Q99986 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 AC138035.3-201ENST00000622706 2791 ntBASIC13.98□□□□□ -0.17
VRK1Q99986 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.98□□□□□ -0.17
VRK1Q99986 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.98□□□□□ -0.17
VRK1Q99986 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VRK1Q99986 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
VRK1Q99986 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VRK1Q99986 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VRK1Q99986 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms