Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.62■□□□□ 0.25
RAD9AQ99638 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.62■□□□□ 0.25
RAD9AQ99638 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
RAD9AQ99638 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RAD9AQ99638 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.62■□□□□ 0.25
RAD9AQ99638 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.62■□□□□ 0.25
RAD9AQ99638 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAD9AQ99638 ENPP7P14-201ENST00000621765 1040 ntBASIC16.62■□□□□ 0.25
RAD9AQ99638 PRSS30P-206ENST00000641773 873 ntBASIC16.62■□□□□ 0.25
RAD9AQ99638 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD9AQ99638 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
RAD9AQ99638 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD9AQ99638 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD9AQ99638 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.62■□□□□ 0.25
RAD9AQ99638 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.62■□□□□ 0.25
RAD9AQ99638 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD9AQ99638 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAD9AQ99638 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.62■□□□□ 0.25
RAD9AQ99638 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RAD9AQ99638 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAD9AQ99638 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.62■□□□□ 0.25
RAD9AQ99638 AC148477.4-201ENST00000613430 1793 ntBASIC16.61■□□□□ 0.25
RAD9AQ99638 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAD9AQ99638 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAD9AQ99638 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAD9AQ99638 AC022211.2-201ENST00000585075 2527 ntBASIC16.61■□□□□ 0.25
RAD9AQ99638 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAD9AQ99638 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAD9AQ99638 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD9AQ99638 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
RAD9AQ99638 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD9AQ99638 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.61■□□□□ 0.25
RAD9AQ99638 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD9AQ99638 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.61■□□□□ 0.25
RAD9AQ99638 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
RAD9AQ99638 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAD9AQ99638 FAM8A4P-201ENST00000435433 1213 ntBASIC16.61■□□□□ 0.25
RAD9AQ99638 MAGEA5-201ENST00000446757 942 ntBASIC16.61■□□□□ 0.25
RAD9AQ99638 RPS2P36-201ENST00000456516 831 ntBASIC16.61■□□□□ 0.25
RAD9AQ99638 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.61■□□□□ 0.25
RAD9AQ99638 AC044849.1-201ENST00000519737 1188 ntBASIC16.61■□□□□ 0.25
RAD9AQ99638 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.61■□□□□ 0.25
RAD9AQ99638 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RAD9AQ99638 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.61■□□□□ 0.25
RAD9AQ99638 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD9AQ99638 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
RAD9AQ99638 AP001505.2-201ENST00000616815 443 ntBASIC16.61■□□□□ 0.25
RAD9AQ99638 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.61■□□□□ 0.25
RAD9AQ99638 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAD9AQ99638 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD9AQ99638 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD9AQ99638 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD9AQ99638 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAD9AQ99638 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.61■□□□□ 0.25
RAD9AQ99638 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.61■□□□□ 0.25
RAD9AQ99638 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD9AQ99638 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAD9AQ99638 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD9AQ99638 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
RAD9AQ99638 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.61■□□□□ 0.25
RAD9AQ99638 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAD9AQ99638 AC011477.6-201ENST00000604980 1927 ntBASIC16.6■□□□□ 0.25
RAD9AQ99638 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RAD9AQ99638 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD9AQ99638 LRRC59-203ENST00000576448 1531 ntBASIC16.6■□□□□ 0.25
RAD9AQ99638 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RAD9AQ99638 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.6■□□□□ 0.25
RAD9AQ99638 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD9AQ99638 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.6■□□□□ 0.25
RAD9AQ99638 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD9AQ99638 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD9AQ99638 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD9AQ99638 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAD9AQ99638 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD9AQ99638 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAD9AQ99638 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD9AQ99638 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD9AQ99638 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.6■□□□□ 0.25
RAD9AQ99638 AC253536.4-201ENST00000440539 267 ntBASIC16.6■□□□□ 0.25
RAD9AQ99638 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.6■□□□□ 0.25
RAD9AQ99638 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.6■□□□□ 0.25
RAD9AQ99638 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD9AQ99638 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.6■□□□□ 0.25
RAD9AQ99638 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.6■□□□□ 0.25
RAD9AQ99638 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.6■□□□□ 0.25
RAD9AQ99638 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.6■□□□□ 0.25
RAD9AQ99638 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD9AQ99638 SPCS2P2-201ENST00000603270 608 ntBASIC16.6■□□□□ 0.25
RAD9AQ99638 AC128714.1-201ENST00000637035 887 ntBASIC16.6■□□□□ 0.25
RAD9AQ99638 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RAD9AQ99638 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD9AQ99638 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.6■□□□□ 0.25
RAD9AQ99638 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD9AQ99638 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.6■□□□□ 0.25
RAD9AQ99638 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RAD9AQ99638 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.6■□□□□ 0.25
RAD9AQ99638 ALOX12P2-203ENST00000570921 1945 ntBASIC16.6■□□□□ 0.25
RAD9AQ99638 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD9AQ99638 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RAD9AQ99638 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms