Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 PPY2P-201ENST00000582808 702 ntBASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 MIR6869-201ENST00000619434 62 ntBASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 AC114812.1-204ENST00000449669 728 ntBASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 AL096828.3-201ENST00000615354 462 ntBASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 GPR182-203ENST00000622922 591 ntBASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 AL603764.1-201ENST00000636452 321 ntBASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 KRT8P44-201ENST00000441609 1350 ntBASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 HOMER2P2-201ENST00000451621 847 ntBASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 AC104306.2-201ENST00000451877 341 ntBASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 FAM8A2P-201ENST00000528813 1142 ntBASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.12■□□□□ 0.49
CDK5RAP2Q96SN8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 AL023775.1-201ENST00000454907 1746 ntBASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 ACTBP11-201ENST00000436287 1126 ntBASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP2Q96SN8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP2Q96SN8 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC18.1■□□□□ 0.49
CDK5RAP2Q96SN8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP2Q96SN8 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.1■□□□□ 0.49
CDK5RAP2Q96SN8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.1■□□□□ 0.49
CDK5RAP2Q96SN8 AC020907.1-201ENST00000616460 1350 ntBASIC18.1■□□□□ 0.49
CDK5RAP2Q96SN8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CDK5RAP2Q96SN8 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP2Q96SN8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP2Q96SN8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CDK5RAP2Q96SN8 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.1■□□□□ 0.49
CDK5RAP2Q96SN8 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.1■□□□□ 0.49
CDK5RAP2Q96SN8 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.1■□□□□ 0.49
CDK5RAP2Q96SN8 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP2Q96SN8 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms