Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 PMS2P2-201ENST00000425039 1128 ntBASIC14.41□□□□□ -0.1
SNX18Q96RF0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 SNHG9-202ENST00000564014 471 ntBASIC14.41□□□□□ -0.1
SNX18Q96RF0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 AC232323.1-201ENST00000540724 2099 ntBASIC14.41□□□□□ -0.1
SNX18Q96RF0 REXO1L5P-201ENST00000622260 2098 ntBASIC14.41□□□□□ -0.1
SNX18Q96RF0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SNX18Q96RF0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SNX18Q96RF0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.4□□□□□ -0.1
SNX18Q96RF0 SSR4P1-203ENST00000599569 2260 ntBASIC14.4□□□□□ -0.1
SNX18Q96RF0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.4□□□□□ -0.1
SNX18Q96RF0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.4□□□□□ -0.1
SNX18Q96RF0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX18Q96RF0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SNX18Q96RF0 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX18Q96RF0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX18Q96RF0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 HTR5BP-201ENST00000430851 1154 ntBASIC14.4□□□□□ -0.1
SNX18Q96RF0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX18Q96RF0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.4□□□□□ -0.1
SNX18Q96RF0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 AC099522.2-201ENST00000607001 744 ntBASIC14.4□□□□□ -0.1
SNX18Q96RF0 C20orf181-201ENST00000623918 480 ntBASIC14.4□□□□□ -0.1
SNX18Q96RF0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SNX18Q96RF0 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX18Q96RF0 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SNX18Q96RF0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX18Q96RF0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SNX18Q96RF0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
SNX18Q96RF0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 AC007686.3-201ENST00000619017 3487 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms