Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 CNN2P2-201ENST00000443536 909 ntBASIC14.92□□□□□ -0.02
COL21A1Q96P44 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 CNN2P3-201ENST00000450201 906 ntBASIC14.92□□□□□ -0.02
COL21A1Q96P44 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 AC092183.1-201ENST00000469884 875 ntBASIC14.92□□□□□ -0.02
COL21A1Q96P44 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 AC069262.1-201ENST00000539058 672 ntBASIC14.92□□□□□ -0.02
COL21A1Q96P44 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 AC026979.3-201ENST00000607315 403 ntBASIC14.92□□□□□ -0.02
COL21A1Q96P44 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 AL136317.3-201ENST00000618497 906 ntBASIC14.92□□□□□ -0.02
COL21A1Q96P44 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 AC092127.1-201ENST00000567093 3455 ntBASIC14.91□□□□□ -0.02
COL21A1Q96P44 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 AC087481.3-201ENST00000602886 1894 ntBASIC14.91□□□□□ -0.02
COL21A1Q96P44 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL21A1Q96P44 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
COL21A1Q96P44 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.9□□□□□ -0.02
COL21A1Q96P44 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 AL109954.1-202ENST00000564051 2148 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms