Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 AC004461.1-201ENST00000412461 403 ntBASIC16.25■□□□□ 0.19
C9orf72Q96LT7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 ADH5P3-201ENST00000433842 1137 ntBASIC16.25■□□□□ 0.19
C9orf72Q96LT7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 MIR4313-201ENST00000580760 101 ntBASIC16.25■□□□□ 0.19
C9orf72Q96LT7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 AC022145.2-201ENST00000598203 171 ntBASIC16.25■□□□□ 0.19
C9orf72Q96LT7 AL355385.1-201ENST00000606123 409 ntBASIC16.25■□□□□ 0.19
C9orf72Q96LT7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 BNIP3P1-202ENST00000550043 1585 ntBASIC16.25■□□□□ 0.19
C9orf72Q96LT7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C9orf72Q96LT7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 AL355306.1-201ENST00000415580 579 ntBASIC16.24■□□□□ 0.19
C9orf72Q96LT7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 AL671277.1-201ENST00000429656 993 ntBASIC16.24■□□□□ 0.19
C9orf72Q96LT7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 FAM86C2P-203ENST00000528684 1004 ntBASIC16.24■□□□□ 0.19
C9orf72Q96LT7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 AC099522.2-201ENST00000607001 744 ntBASIC16.24■□□□□ 0.19
C9orf72Q96LT7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 AC127383.1-201ENST00000444697 1800 ntBASIC16.24■□□□□ 0.19
C9orf72Q96LT7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C9orf72Q96LT7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
C9orf72Q96LT7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.23■□□□□ 0.19
C9orf72Q96LT7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms