Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 PCGF3-213ENST00000620529 1899 ntBASIC18.38■□□□□ 0.53
TRIM47Q96LD4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 GPAA1P2-201ENST00000417923 928 ntBASIC18.38■□□□□ 0.53
TRIM47Q96LD4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 AL359711.2-201ENST00000563105 872 ntBASIC18.38■□□□□ 0.53
TRIM47Q96LD4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 AC046158.3-201ENST00000624947 2558 ntBASIC18.38■□□□□ 0.53
TRIM47Q96LD4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.38■□□□□ 0.53
TRIM47Q96LD4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TRIM47Q96LD4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 ELK2AP-201ENST00000392510 1007 ntBASIC18.37■□□□□ 0.53
TRIM47Q96LD4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 AP001889.1-201ENST00000525414 633 ntBASIC18.37■□□□□ 0.53
TRIM47Q96LD4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.37■□□□□ 0.53
TRIM47Q96LD4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 AL596087.1-201ENST00000400979 1969 ntBASIC18.37■□□□□ 0.53
TRIM47Q96LD4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM47Q96LD4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 AC022188.1-201ENST00000620960 1664 ntBASIC18.36■□□□□ 0.53
TRIM47Q96LD4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRIM47Q96LD4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms