Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 NAP1L6-202ENST00000641404 1222 ntBASIC16.68■□□□□ 0.26
ALPK3Q96L96 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALPK3Q96L96 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
ALPK3Q96L96 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.68■□□□□ 0.26
ALPK3Q96L96 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.68■□□□□ 0.26
ALPK3Q96L96 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
ALPK3Q96L96 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALPK3Q96L96 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALPK3Q96L96 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.68■□□□□ 0.26
ALPK3Q96L96 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ALPK3Q96L96 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ALPK3Q96L96 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALPK3Q96L96 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALPK3Q96L96 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.68■□□□□ 0.26
ALPK3Q96L96 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALPK3Q96L96 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.68■□□□□ 0.26
ALPK3Q96L96 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
ALPK3Q96L96 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALPK3Q96L96 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALPK3Q96L96 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ALPK3Q96L96 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.68■□□□□ 0.26
ALPK3Q96L96 TUBB8P8-201ENST00000458717 1058 ntBASIC16.68■□□□□ 0.26
ALPK3Q96L96 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.68■□□□□ 0.26
ALPK3Q96L96 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.68■□□□□ 0.26
ALPK3Q96L96 AC005962.1-201ENST00000584100 773 ntBASIC16.68■□□□□ 0.26
ALPK3Q96L96 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.68■□□□□ 0.26
ALPK3Q96L96 AC107464.3-201ENST00000609172 737 ntBASIC16.68■□□□□ 0.26
ALPK3Q96L96 AC138466.4-201ENST00000623965 852 ntBASIC16.68■□□□□ 0.26
ALPK3Q96L96 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.68■□□□□ 0.26
ALPK3Q96L96 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALPK3Q96L96 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
ALPK3Q96L96 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALPK3Q96L96 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALPK3Q96L96 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ALPK3Q96L96 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ALPK3Q96L96 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
ALPK3Q96L96 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALPK3Q96L96 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ALPK3Q96L96 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ALPK3Q96L96 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALPK3Q96L96 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALPK3Q96L96 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ALPK3Q96L96 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.67■□□□□ 0.26
ALPK3Q96L96 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC16.67■□□□□ 0.26
ALPK3Q96L96 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALPK3Q96L96 AL627231.1-201ENST00000394467 1125 ntBASIC16.67■□□□□ 0.26
ALPK3Q96L96 MESTP3-201ENST00000503460 968 ntBASIC16.67■□□□□ 0.26
ALPK3Q96L96 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.67■□□□□ 0.26
ALPK3Q96L96 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.67■□□□□ 0.26
ALPK3Q96L96 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ALPK3Q96L96 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALPK3Q96L96 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.67■□□□□ 0.26
ALPK3Q96L96 DUX4L47-201ENST00000566374 394 ntBASIC16.67■□□□□ 0.26
ALPK3Q96L96 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ALPK3Q96L96 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ALPK3Q96L96 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALPK3Q96L96 AL109837.1-201ENST00000603272 613 ntBASIC16.67■□□□□ 0.26
ALPK3Q96L96 MIR6858-201ENST00000620733 67 ntBASIC16.67■□□□□ 0.26
ALPK3Q96L96 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALPK3Q96L96 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ALPK3Q96L96 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.67■□□□□ 0.26
ALPK3Q96L96 MBLAC2-202ENST00000514906 1936 ntBASIC16.67■□□□□ 0.26
ALPK3Q96L96 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALPK3Q96L96 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ALPK3Q96L96 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ALPK3Q96L96 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALPK3Q96L96 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.67■□□□□ 0.26
ALPK3Q96L96 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.67■□□□□ 0.26
ALPK3Q96L96 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
ALPK3Q96L96 AC055811.4-201ENST00000624039 1754 ntBASIC16.67■□□□□ 0.26
ALPK3Q96L96 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.67■□□□□ 0.26
ALPK3Q96L96 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALPK3Q96L96 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.66■□□□□ 0.26
ALPK3Q96L96 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.66■□□□□ 0.26
ALPK3Q96L96 AC010141.1-201ENST00000411585 623 ntBASIC16.66■□□□□ 0.26
ALPK3Q96L96 SHC1P1-201ENST00000425230 1745 ntBASIC16.66■□□□□ 0.26
ALPK3Q96L96 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ALPK3Q96L96 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALPK3Q96L96 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.66■□□□□ 0.26
ALPK3Q96L96 AC027139.1-201ENST00000565286 951 ntBASIC16.66■□□□□ 0.26
ALPK3Q96L96 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.66■□□□□ 0.26
ALPK3Q96L96 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
ALPK3Q96L96 RN7SL163P-201ENST00000583100 276 ntBASIC16.66■□□□□ 0.26
ALPK3Q96L96 MIR4522-201ENST00000584932 87 ntBASIC16.66■□□□□ 0.26
ALPK3Q96L96 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ALPK3Q96L96 AC002472.3-201ENST00000640124 621 ntBASIC16.66■□□□□ 0.26
ALPK3Q96L96 AL645728.2-202ENST00000641679 227 ntBASIC16.66■□□□□ 0.26
ALPK3Q96L96 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALPK3Q96L96 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALPK3Q96L96 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALPK3Q96L96 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALPK3Q96L96 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALPK3Q96L96 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALPK3Q96L96 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.66■□□□□ 0.26
ALPK3Q96L96 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ALPK3Q96L96 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALPK3Q96L96 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALPK3Q96L96 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC16.66■□□□□ 0.26
ALPK3Q96L96 AL031713.1-201ENST00000564813 661 ntBASIC16.66■□□□□ 0.26
ALPK3Q96L96 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms