Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX27Q96L92 AP003680.1-201ENST00000598970 3660 ntBASIC16.89■□□□□ 0.29
SNX27Q96L92 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX27Q96L92 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.89■□□□□ 0.29
SNX27Q96L92 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX27Q96L92 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX27Q96L92 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNX27Q96L92 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SNX27Q96L92 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX27Q96L92 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.88■□□□□ 0.29
SNX27Q96L92 AP005117.1-202ENST00000581724 1908 ntBASIC16.88■□□□□ 0.29
SNX27Q96L92 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
SNX27Q96L92 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX27Q96L92 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX27Q96L92 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNX27Q96L92 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX27Q96L92 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SNX27Q96L92 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNX27Q96L92 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.88■□□□□ 0.29
SNX27Q96L92 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.88■□□□□ 0.29
SNX27Q96L92 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SNX27Q96L92 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX27Q96L92 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX27Q96L92 C1QBPP1-201ENST00000400117 770 ntBASIC16.88■□□□□ 0.29
SNX27Q96L92 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SNX27Q96L92 SOCS2P1-201ENST00000417727 557 ntBASIC16.88■□□□□ 0.29
SNX27Q96L92 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SNX27Q96L92 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX27Q96L92 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.88■□□□□ 0.29
SNX27Q96L92 AC026410.3-201ENST00000514280 936 ntBASIC16.88■□□□□ 0.29
SNX27Q96L92 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.88■□□□□ 0.29
SNX27Q96L92 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX27Q96L92 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.88■□□□□ 0.29
SNX27Q96L92 AP005482.1-201ENST00000563722 1273 ntBASIC16.88■□□□□ 0.29
SNX27Q96L92 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SNX27Q96L92 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.88■□□□□ 0.29
SNX27Q96L92 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX27Q96L92 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.88■□□□□ 0.29
SNX27Q96L92 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX27Q96L92 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX27Q96L92 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX27Q96L92 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SNX27Q96L92 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX27Q96L92 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX27Q96L92 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX27Q96L92 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.88■□□□□ 0.29
SNX27Q96L92 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SNX27Q96L92 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SNX27Q96L92 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SNX27Q96L92 DRD5P1-201ENST00000456605 1438 ntBASIC16.87■□□□□ 0.29
SNX27Q96L92 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX27Q96L92 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX27Q96L92 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX27Q96L92 AC127383.1-201ENST00000444697 1800 ntBASIC16.87■□□□□ 0.29
SNX27Q96L92 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.87■□□□□ 0.29
SNX27Q96L92 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX27Q96L92 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX27Q96L92 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.87■□□□□ 0.29
SNX27Q96L92 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX27Q96L92 KRT223P-202ENST00000449164 1292 ntBASIC16.87■□□□□ 0.29
SNX27Q96L92 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.87■□□□□ 0.29
SNX27Q96L92 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX27Q96L92 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX27Q96L92 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.87■□□□□ 0.29
SNX27Q96L92 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX27Q96L92 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.87■□□□□ 0.29
SNX27Q96L92 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SNX27Q96L92 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.87■□□□□ 0.29
SNX27Q96L92 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX27Q96L92 COX11-210ENST00000639671 696 ntBASIC16.87■□□□□ 0.29
SNX27Q96L92 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX27Q96L92 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX27Q96L92 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX27Q96L92 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX27Q96L92 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX27Q96L92 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX27Q96L92 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX27Q96L92 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX27Q96L92 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX27Q96L92 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX27Q96L92 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX27Q96L92 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX27Q96L92 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX27Q96L92 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX27Q96L92 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SNX27Q96L92 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX27Q96L92 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX27Q96L92 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX27Q96L92 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.86■□□□□ 0.29
SNX27Q96L92 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SNX27Q96L92 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.86■□□□□ 0.29
SNX27Q96L92 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.86■□□□□ 0.29
SNX27Q96L92 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX27Q96L92 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SNX27Q96L92 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SNX27Q96L92 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX27Q96L92 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX27Q96L92 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC16.86■□□□□ 0.29
SNX27Q96L92 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.86■□□□□ 0.29
SNX27Q96L92 GAPDHP40-201ENST00000505218 1006 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms