Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 RN7SL752P-201ENST00000463779 287 ntBASIC16.62■□□□□ 0.25
ATP2A3Q93084 AC011495.1-201ENST00000498085 584 ntBASIC16.62■□□□□ 0.25
ATP2A3Q93084 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 TPRX2P-201ENST00000535362 881 ntBASIC16.62■□□□□ 0.25
ATP2A3Q93084 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 AC004790.1-201ENST00000612686 536 ntBASIC16.62■□□□□ 0.25
ATP2A3Q93084 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 AC007431.3-201ENST00000623221 587 ntBASIC16.62■□□□□ 0.25
ATP2A3Q93084 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 REXO1L8P-201ENST00000604378 1897 ntBASIC16.62■□□□□ 0.25
ATP2A3Q93084 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 AL603832.2-201ENST00000566195 2125 ntBASIC16.61■□□□□ 0.25
ATP2A3Q93084 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 AC008494.3-201ENST00000606615 944 ntBASIC16.61■□□□□ 0.25
ATP2A3Q93084 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.61■□□□□ 0.25
ATP2A3Q93084 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A3Q93084 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A3Q93084 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A3Q93084 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A3Q93084 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A3Q93084 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A3Q93084 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A3Q93084 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms