Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 AC093004.1-201ENST00000508850 424 ntBASIC17.73■□□□□ 0.43
TNFRSF25Q93038 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFRSF25Q93038 LINC02560-201ENST00000596379 459 ntBASIC17.73■□□□□ 0.43
TNFRSF25Q93038 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.73■□□□□ 0.43
TNFRSF25Q93038 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.73■□□□□ 0.43
TNFRSF25Q93038 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFRSF25Q93038 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TNFRSF25Q93038 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF25Q93038 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF25Q93038 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF25Q93038 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF25Q93038 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TNFRSF25Q93038 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.73■□□□□ 0.43
TNFRSF25Q93038 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF25Q93038 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
TNFRSF25Q93038 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF25Q93038 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
TNFRSF25Q93038 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.73■□□□□ 0.43
TNFRSF25Q93038 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 AC098850.1-201ENST00000419919 790 ntBASIC17.72■□□□□ 0.43
TNFRSF25Q93038 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 AC002472.2-201ENST00000442739 958 ntBASIC17.72■□□□□ 0.43
TNFRSF25Q93038 FAM86LP-201ENST00000478302 853 ntBASIC17.72■□□□□ 0.43
TNFRSF25Q93038 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 RRP7BP-205ENST00000566851 833 ntBASIC17.72■□□□□ 0.43
TNFRSF25Q93038 AC008761.3-201ENST00000624803 892 ntBASIC17.72■□□□□ 0.43
TNFRSF25Q93038 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 DRD5P1-201ENST00000456605 1438 ntBASIC17.72■□□□□ 0.43
TNFRSF25Q93038 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.72■□□□□ 0.43
TNFRSF25Q93038 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 AC006058.4-201ENST00000624016 1670 ntBASIC17.71■□□□□ 0.43
TNFRSF25Q93038 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 AC236430.1-201ENST00000402231 743 ntBASIC17.71■□□□□ 0.43
TNFRSF25Q93038 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 BRI3BPP1-201ENST00000594224 787 ntBASIC17.71■□□□□ 0.43
TNFRSF25Q93038 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF25Q93038 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TNFRSF25Q93038 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.71■□□□□ 0.42
TNFRSF25Q93038 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms