Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S1Q92572 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S1Q92572 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.92□□□□□ -0.18
AP3S1Q92572 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.92□□□□□ -0.18
AP3S1Q92572 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S1Q92572 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.92□□□□□ -0.18
AP3S1Q92572 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.92□□□□□ -0.18
AP3S1Q92572 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S1Q92572 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S1Q92572 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S1Q92572 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.92□□□□□ -0.18
AP3S1Q92572 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S1Q92572 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S1Q92572 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S1Q92572 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S1Q92572 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S1Q92572 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S1Q92572 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.92□□□□□ -0.18
AP3S1Q92572 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.92□□□□□ -0.18
AP3S1Q92572 AL031595.1-201ENST00000623969 4709 ntBASIC13.92□□□□□ -0.18
AP3S1Q92572 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.92□□□□□ -0.18
AP3S1Q92572 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S1Q92572 AC027601.5-201ENST00000624065 2482 ntBASIC13.91□□□□□ -0.18
AP3S1Q92572 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.91□□□□□ -0.18
AP3S1Q92572 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S1Q92572 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S1Q92572 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S1Q92572 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S1Q92572 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
AP3S1Q92572 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
AP3S1Q92572 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.91□□□□□ -0.18
AP3S1Q92572 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S1Q92572 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S1Q92572 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S1Q92572 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S1Q92572 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S1Q92572 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
AP3S1Q92572 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
AP3S1Q92572 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S1Q92572 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S1Q92572 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
AP3S1Q92572 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.91□□□□□ -0.18
AP3S1Q92572 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
AP3S1Q92572 AK4P3-201ENST00000418260 669 ntBASIC13.91□□□□□ -0.18
AP3S1Q92572 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.91□□□□□ -0.18
AP3S1Q92572 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.91□□□□□ -0.18
AP3S1Q92572 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.91□□□□□ -0.18
AP3S1Q92572 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.91□□□□□ -0.18
AP3S1Q92572 AC139887.3-201ENST00000568585 713 ntBASIC13.91□□□□□ -0.18
AP3S1Q92572 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
AP3S1Q92572 MIR4321-201ENST00000592276 80 ntBASIC13.91□□□□□ -0.18
AP3S1Q92572 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.91□□□□□ -0.18
AP3S1Q92572 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
AP3S1Q92572 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.91□□□□□ -0.18
AP3S1Q92572 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
AP3S1Q92572 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.91□□□□□ -0.18
AP3S1Q92572 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S1Q92572 AL359183.1-201ENST00000623796 2132 ntBASIC13.91□□□□□ -0.18
AP3S1Q92572 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.91□□□□□ -0.18
AP3S1Q92572 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.91□□□□□ -0.18
AP3S1Q92572 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.91□□□□□ -0.18
AP3S1Q92572 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S1Q92572 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
AP3S1Q92572 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
AP3S1Q92572 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S1Q92572 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S1Q92572 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.9□□□□□ -0.18
AP3S1Q92572 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
AP3S1Q92572 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
AP3S1Q92572 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
AP3S1Q92572 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.9□□□□□ -0.18
AP3S1Q92572 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S1Q92572 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S1Q92572 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.9□□□□□ -0.18
AP3S1Q92572 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
AP3S1Q92572 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.9□□□□□ -0.18
AP3S1Q92572 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S1Q92572 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S1Q92572 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S1Q92572 TERF1P1-201ENST00000311003 1181 ntBASIC13.9□□□□□ -0.18
AP3S1Q92572 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.9□□□□□ -0.18
AP3S1Q92572 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.9□□□□□ -0.18
AP3S1Q92572 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.9□□□□□ -0.18
AP3S1Q92572 AP002469.2-201ENST00000531724 424 ntBASIC13.9□□□□□ -0.18
AP3S1Q92572 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.9□□□□□ -0.18
AP3S1Q92572 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.9□□□□□ -0.18
AP3S1Q92572 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.9□□□□□ -0.18
AP3S1Q92572 AC005363.2-201ENST00000618631 242 ntBASIC13.9□□□□□ -0.18
AP3S1Q92572 AL805961.1-202ENST00000641562 540 ntBASIC13.9□□□□□ -0.18
AP3S1Q92572 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.9□□□□□ -0.18
AP3S1Q92572 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.9□□□□□ -0.18
AP3S1Q92572 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.9□□□□□ -0.18
AP3S1Q92572 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S1Q92572 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S1Q92572 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
AP3S1Q92572 AL731571.1-201ENST00000617058 5428 ntBASIC13.9□□□□□ -0.18
AP3S1Q92572 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S1Q92572 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S1Q92572 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.9□□□□□ -0.18
AP3S1Q92572 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms