Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 AL442647.2-201ENST00000429864 857 ntBASIC18.42■□□□□ 0.54
STAG1Q8WVM7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 RN7SL752P-201ENST00000463779 287 ntBASIC18.42■□□□□ 0.54
STAG1Q8WVM7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 GAPDHP40-201ENST00000505218 1006 ntBASIC18.42■□□□□ 0.54
STAG1Q8WVM7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 AL049840.4-201ENST00000602422 811 ntBASIC18.42■□□□□ 0.54
STAG1Q8WVM7 AC025181.2-201ENST00000606994 802 ntBASIC18.42■□□□□ 0.54
STAG1Q8WVM7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.42■□□□□ 0.54
STAG1Q8WVM7 AC132872.4-202ENST00000622924 2756 ntBASIC18.42■□□□□ 0.54
STAG1Q8WVM7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 GK-202ENST00000378941 458 ntTSL 3 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 INE1-201ENST00000456273 945 ntBASIC18.41■□□□□ 0.54
STAG1Q8WVM7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
STAG1Q8WVM7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms