Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CT55Q8WUE5 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.54□□□□□ -0.08
CT55Q8WUE5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CT55Q8WUE5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CT55Q8WUE5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CT55Q8WUE5 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.54□□□□□ -0.08
CT55Q8WUE5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CT55Q8WUE5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 AC243960.2-201ENST00000600996 747 ntBASIC14.53□□□□□ -0.08
CT55Q8WUE5 AC025181.2-201ENST00000606994 802 ntBASIC14.53□□□□□ -0.08
CT55Q8WUE5 AC244093.1-201ENST00000610837 814 ntBASIC14.53□□□□□ -0.08
CT55Q8WUE5 AC091271.1-201ENST00000611877 1162 ntBASIC14.53□□□□□ -0.08
CT55Q8WUE5 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.53□□□□□ -0.08
CT55Q8WUE5 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CT55Q8WUE5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CT55Q8WUE5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CT55Q8WUE5 AL138709.1-201ENST00000614840 1693 ntBASIC14.52□□□□□ -0.08
CT55Q8WUE5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CT55Q8WUE5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.08
CT55Q8WUE5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CT55Q8WUE5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
CT55Q8WUE5 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CT55Q8WUE5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.52□□□□□ -0.08
CT55Q8WUE5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CT55Q8WUE5 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.52□□□□□ -0.08
CT55Q8WUE5 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CT55Q8WUE5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CT55Q8WUE5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CT55Q8WUE5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CT55Q8WUE5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CT55Q8WUE5 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.52□□□□□ -0.08
CT55Q8WUE5 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CT55Q8WUE5 AC006001.1-201ENST00000325130 474 ntBASIC14.52□□□□□ -0.09
CT55Q8WUE5 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CT55Q8WUE5 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CT55Q8WUE5 RNU1-114P-201ENST00000365297 166 ntBASIC14.52□□□□□ -0.09
CT55Q8WUE5 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CT55Q8WUE5 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CT55Q8WUE5 AL590640.2-201ENST00000457038 527 ntBASIC14.52□□□□□ -0.09
CT55Q8WUE5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CT55Q8WUE5 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CT55Q8WUE5 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CT55Q8WUE5 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CT55Q8WUE5 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CT55Q8WUE5 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CT55Q8WUE5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms