Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 TARDBPP1-201ENST00000442013 1203 ntBASIC15.04■□□□□ -0
SRFBP1Q8NEF9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.04■□□□□ -0
SRFBP1Q8NEF9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 AC025048.3-201ENST00000590609 569 ntBASIC15.04■□□□□ -0
SRFBP1Q8NEF9 AC074044.1-201ENST00000609673 707 ntBASIC15.04■□□□□ -0
SRFBP1Q8NEF9 AC138649.4-201ENST00000612222 287 ntBASIC15.04■□□□□ -0
SRFBP1Q8NEF9 AC005702.4-201ENST00000618393 416 ntBASIC15.04■□□□□ -0
SRFBP1Q8NEF9 AL590560.3-201ENST00000623350 461 ntBASIC15.04■□□□□ -0
SRFBP1Q8NEF9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRFBP1Q8NEF9 PCDHA3-202ENST00000532566 4594 ntBASIC15.04■□□□□ -0
SRFBP1Q8NEF9 AC020658.6-201ENST00000623564 1870 ntBASIC15.03■□□□□ -0
SRFBP1Q8NEF9 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 AL512361.1-201ENST00000554200 418 ntBASIC15.03■□□□□ -0
SRFBP1Q8NEF9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 AC010336.2-201ENST00000564226 506 ntBASIC15.03■□□□□ -0
SRFBP1Q8NEF9 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 CICP13-201ENST00000422015 2789 ntBASIC15.03■□□□□ -0
SRFBP1Q8NEF9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRFBP1Q8NEF9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms