Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 AC106886.1-201ENST00000568660 600 ntBASIC16.03■□□□□ 0.16
KDM1BQ8NB78 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 MIR8072-201ENST00000614241 80 ntBASIC16.03■□□□□ 0.16
KDM1BQ8NB78 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.03■□□□□ 0.16
KDM1BQ8NB78 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 MST1L-201ENST00000442552 2185 ntBASIC16.02■□□□□ 0.16
KDM1BQ8NB78 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 AC023824.1-201ENST00000562945 2975 ntBASIC16.02■□□□□ 0.16
KDM1BQ8NB78 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.02■□□□□ 0.16
KDM1BQ8NB78 IGHV3-72-202ENST00000621503 303 ntBASIC16.02■□□□□ 0.16
KDM1BQ8NB78 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KDM1BQ8NB78 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.02■□□□□ 0.15
KDM1BQ8NB78 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.02■□□□□ 0.15
KDM1BQ8NB78 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KDM1BQ8NB78 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
KDM1BQ8NB78 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
KDM1BQ8NB78 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.02■□□□□ 0.15
KDM1BQ8NB78 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KDM1BQ8NB78 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
KDM1BQ8NB78 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
KDM1BQ8NB78 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.02■□□□□ 0.15
KDM1BQ8NB78 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.02■□□□□ 0.15
KDM1BQ8NB78 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KDM1BQ8NB78 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KDM1BQ8NB78 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.01■□□□□ 0.15
KDM1BQ8NB78 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.01■□□□□ 0.15
KDM1BQ8NB78 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KDM1BQ8NB78 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.01■□□□□ 0.15
KDM1BQ8NB78 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
KDM1BQ8NB78 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KDM1BQ8NB78 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.01■□□□□ 0.15
KDM1BQ8NB78 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KDM1BQ8NB78 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
KDM1BQ8NB78 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms