Protein–RNA interactions for Protein: Q8N1G4

LRRC47, Leucine-rich repeat-containing protein 47, humanhuman

Known RBP Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47Q8N1G4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 MIR658-201ENST00000385210 100 ntBASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 ACTG1P3-201ENST00000431775 1114 ntBASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 AC233724.13-201ENST00000598383 410 ntBASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC47Q8N1G4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 AC234783.1-201ENST00000441761 496 ntBASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 AC022210.1-201ENST00000449856 793 ntBASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 ENPP7P5-201ENST00000541031 1031 ntBASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 AC127383.1-201ENST00000444697 1800 ntBASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LRRC47Q8N1G4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC47Q8N1G4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
LRRC47Q8N1G4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC47Q8N1G4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC47Q8N1G4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC47Q8N1G4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC47Q8N1G4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC47Q8N1G4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms