Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 FO538757.1-201ENST00000623083 1397 ntBASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 TMBIM7P-203ENST00000641617 1718 ntBASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 AC068418.2-201ENST00000577309 3703 ntBASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 AL080243.2-201ENST00000418783 582 ntBASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 AC107890.1-201ENST00000422478 521 ntBASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 FAM86GP-201ENST00000448322 971 ntBASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 HLA-V-204ENST00000476601 1289 ntBASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 AC069120.2-201ENST00000524091 540 ntBASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 AC051619.7-201ENST00000568314 623 ntBASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 AC006538.3-201ENST00000612495 578 ntBASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 SPDYE12P-201ENST00000618416 771 ntBASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC116Q8IYX3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 HNRNPA1P23-201ENST00000491091 1133 ntBASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 AC067863.1-201ENST00000494933 530 ntBASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 AC027369.6-201ENST00000525520 931 ntBASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 AC104640.1-201ENST00000562617 2109 ntBASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 AC140878.1-201ENST00000565277 250 ntBASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 AC015911.4-201ENST00000588022 1070 ntBASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 AC073592.8-201ENST00000624126 511 ntBASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 AL033527.5-202ENST00000641632 1098 ntBASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC116Q8IYX3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms