Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 CROCCP4-201ENST00000457096 498 ntBASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 AL359711.2-201ENST00000563105 872 ntBASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFA11Q86Y39 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.21□□□□□ -0.46
NDUFA11Q86Y39 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA11Q86Y39 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA11Q86Y39 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA11Q86Y39 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA11Q86Y39 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.21□□□□□ -0.46
NDUFA11Q86Y39 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
NDUFA11Q86Y39 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.21□□□□□ -0.46
NDUFA11Q86Y39 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
NDUFA11Q86Y39 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.21□□□□□ -0.46
NDUFA11Q86Y39 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA11Q86Y39 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA11Q86Y39 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA11Q86Y39 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA11Q86Y39 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.21□□□□□ -0.46
NDUFA11Q86Y39 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA11Q86Y39 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 AC105917.1-201ENST00000506637 2539 ntBASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 AL355864.2-201ENST00000447420 863 ntBASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 KLF2P4-201ENST00000451959 1225 ntBASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 AC119751.2-201ENST00000504529 210 ntBASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 AC092658.1-201ENST00000505836 891 ntBASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 SNX29P1-201ENST00000548357 1007 ntBASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 AC009486.1-201ENST00000569860 813 ntBASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 AL049840.4-201ENST00000602422 811 ntBASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
NDUFA11Q86Y39 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.19□□□□□ -0.46
NDUFA11Q86Y39 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA11Q86Y39 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.19□□□□□ -0.46
NDUFA11Q86Y39 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA11Q86Y39 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA11Q86Y39 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA11Q86Y39 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms