Protein–RNA interactions for Protein: Q7Z3S7

CACNA2D4, Voltage-dependent calcium channel subunit alpha-2/delta-4, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4Q7Z3S7 AC006486.2-201ENST00000624246 2199 ntBASIC17.34■□□□□ 0.37
CACNA2D4Q7Z3S7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D4Q7Z3S7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D4Q7Z3S7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D4Q7Z3S7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D4Q7Z3S7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D4Q7Z3S7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CACNA2D4Q7Z3S7 AC138035.3-201ENST00000622706 2791 ntBASIC17.34■□□□□ 0.37
CACNA2D4Q7Z3S7 OR2I1P-210ENST00000642037 4691 ntBASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D4Q7Z3S7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 TFAMP1-201ENST00000412727 736 ntBASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 AL671277.1-201ENST00000429656 993 ntBASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 AC067863.1-201ENST00000494933 530 ntBASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 RNA5SP410-201ENST00000516285 106 ntBASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 AL135744.1-201ENST00000565098 629 ntBASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 AJ011932.1-201ENST00000621707 465 ntBASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 AC018892.3-201ENST00000623986 2499 ntBASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D4Q7Z3S7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 BNIP3P1-202ENST00000550043 1585 ntBASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 FOXO1B-201ENST00000504678 1527 ntBASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 AL355306.1-201ENST00000415580 579 ntBASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 AC008267.7-201ENST00000624570 1194 ntBASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D4Q7Z3S7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CACNA2D4Q7Z3S7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.31■□□□□ 0.36
CACNA2D4Q7Z3S7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms