Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.29□□□□□ -0.12
SHFQ7M4L6 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SHFQ7M4L6 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SHFQ7M4L6 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.28□□□□□ -0.12
SHFQ7M4L6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.28□□□□□ -0.12
SHFQ7M4L6 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 TPM4P1-201ENST00000436100 807 ntBASIC14.28□□□□□ -0.12
SHFQ7M4L6 KRT8P44-201ENST00000441609 1350 ntBASIC14.28□□□□□ -0.12
SHFQ7M4L6 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SHFQ7M4L6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.28□□□□□ -0.12
SHFQ7M4L6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.28□□□□□ -0.12
SHFQ7M4L6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SHFQ7M4L6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.28□□□□□ -0.12
SHFQ7M4L6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.28□□□□□ -0.12
SHFQ7M4L6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
SHFQ7M4L6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SHFQ7M4L6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 AC068137.2-201ENST00000605408 478 ntBASIC14.28□□□□□ -0.12
SHFQ7M4L6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SHFQ7M4L6 AC097376.2-205ENST00000610159 5334 ntBASIC14.28□□□□□ -0.12
SHFQ7M4L6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SHFQ7M4L6 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SHFQ7M4L6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.28□□□□□ -0.12
SHFQ7M4L6 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHFQ7M4L6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.27□□□□□ -0.12
SHFQ7M4L6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.27□□□□□ -0.12
SHFQ7M4L6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHFQ7M4L6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.27□□□□□ -0.12
SHFQ7M4L6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.27□□□□□ -0.12
SHFQ7M4L6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHFQ7M4L6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SHFQ7M4L6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHFQ7M4L6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHFQ7M4L6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.27□□□□□ -0.12
SHFQ7M4L6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHFQ7M4L6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHFQ7M4L6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SHFQ7M4L6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHFQ7M4L6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHFQ7M4L6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.27□□□□□ -0.12
SHFQ7M4L6 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHFQ7M4L6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.27□□□□□ -0.12
SHFQ7M4L6 HLA-A-201ENST00000376802 1334 ntBASIC14.27□□□□□ -0.12
SHFQ7M4L6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.27□□□□□ -0.13
SHFQ7M4L6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SHFQ7M4L6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHFQ7M4L6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.27□□□□□ -0.13
SHFQ7M4L6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.27□□□□□ -0.13
SHFQ7M4L6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.27□□□□□ -0.13
SHFQ7M4L6 MIR4313-201ENST00000580760 101 ntBASIC14.27□□□□□ -0.13
SHFQ7M4L6 AC024267.1-201ENST00000582320 895 ntBASIC14.27□□□□□ -0.13
SHFQ7M4L6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SHFQ7M4L6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.27□□□□□ -0.13
SHFQ7M4L6 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.27□□□□□ -0.13
SHFQ7M4L6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHFQ7M4L6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHFQ7M4L6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHFQ7M4L6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
SHFQ7M4L6 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHFQ7M4L6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHFQ7M4L6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHFQ7M4L6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SHFQ7M4L6 AC023024.2-201ENST00000623561 1993 ntBASIC14.27□□□□□ -0.13
SHFQ7M4L6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.27□□□□□ -0.13
SHFQ7M4L6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SHFQ7M4L6 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.27□□□□□ -0.13
SHFQ7M4L6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHFQ7M4L6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHFQ7M4L6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.27□□□□□ -0.13
SHFQ7M4L6 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHFQ7M4L6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.27□□□□□ -0.13
SHFQ7M4L6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.27□□□□□ -0.13
SHFQ7M4L6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHFQ7M4L6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.27□□□□□ -0.13
SHFQ7M4L6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHFQ7M4L6 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms