Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC027601.5-201ENST00000624065 2482 ntBASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 AL513480.1-201ENST00000451731 511 ntBASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 AJ011931.1-201ENST00000618749 2492 ntBASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 AC004461.1-201ENST00000412461 403 ntBASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 AC092474.2-201ENST00000424288 719 ntBASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 AC092902.6-201ENST00000641783 218 ntBASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 AC112693.3-201ENST00000624819 1983 ntBASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 SNX33P1-201ENST00000592116 1762 ntBASIC16.49■□□□□ 0.23
FOXR1Q6PIV2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 AL512652.2-201ENST00000625156 1716 ntBASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 FGD5P1-202ENST00000614866 2498 ntBASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 AC006277.1-201ENST00000624348 1610 ntBASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXR1Q6PIV2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms