Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 AC007787.1-201ENST00000588095 1583 ntBASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 AL008707.1-201ENST00000422498 534 ntBASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 AL133466.1-201ENST00000447582 150 ntBASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 OR10B1P-201ENST00000601666 907 ntBASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 AP001505.2-201ENST00000616815 443 ntBASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.68■□□□□ 0.26
CNKSR3Q6P9H4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 AL158070.2-201ENST00000623713 1621 ntBASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 SPTLC1P5-201ENST00000450718 252 ntBASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 RN7SL720P-201ENST00000488178 304 ntBASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 AC073413.1-201ENST00000603927 732 ntBASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNKSR3Q6P9H4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 POM121L8P-201ENST00000417732 1281 ntBASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 POM121L9P-203ENST00000441984 1285 ntBASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 MPRIPP1-201ENST00000452433 1089 ntBASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 AC012313.1-201ENST00000593393 3059 ntBASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms