Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 CHCHD2P8-201ENST00000429873 447 ntBASIC14.88□□□□□ -0.03
LPCAT4Q643R3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 AC093724.1-201ENST00000448659 1027 ntBASIC14.88□□□□□ -0.03
LPCAT4Q643R3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 AC104076.2-201ENST00000448912 469 ntBASIC14.87□□□□□ -0.03
LPCAT4Q643R3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 AC022616.7-201ENST00000525383 220 ntBASIC14.87□□□□□ -0.03
LPCAT4Q643R3 AL136038.3-201ENST00000561909 1096 ntBASIC14.87□□□□□ -0.03
LPCAT4Q643R3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 Z69720.1-201ENST00000601483 472 ntBASIC14.87□□□□□ -0.03
LPCAT4Q643R3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 AC113367.3-201ENST00000508316 1912 ntBASIC14.87□□□□□ -0.03
LPCAT4Q643R3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms